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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953600.1_cds_XP_016492686.1_82870
CDS Infomation

[gene=LOC107812162] [db_xref=GeneID:107812162] [protein=laccase-3-like] [protein_id=XP_016492686.1] [location=complement(join(31891..32021,32095..33039,33134..33262,33336..33732,33804..33914))] [gbkey=CDS]
Sequence

ATGGAAACTTCCAAAAAGGCATTGTTCAAAGTCCTATTTGCTACCATTGTGGTTATACTA
AGTCTCCTGCCGCCTACTGCAAATGCAGATATTCACCAACACGAATTTGCTGTTCAAGAA
ACAAGAATAACAAGACTGTGCAAAACCAAGAATATAATAACAGTGAATGGACAATTCCCT
GGGCCAACCTTGACTGTTCGAAATGGGGATAAACTTGTCGTTAGGGTTGCGAATAGAGCA
CGATACAATGTTACCATTCATTGGCATGGAATTCGTCAAATGAGAACTCCATGGGCAGAT
GGACCAGAGTATGTGACACAATGTCCAATAAAACCAGGAGGAGTTTACACATACAGGTTC
ACTATTGAAGACCAAGAGGGTACATTGTGGTGGCATGCTCACAGTAGATGGCTTAGAGCT
ACTGTTTATGGGGCTCTTGTCATCTTACCAAAACAGGGTTCTCATTTTCCTTTCTCACAG
CCTAAAAAGGATATCCCTATTATTCTTGGGGAATGGTGGAACAAAGATATTATTGCACTC
CAAAGACAAACACAGTTCACAGGAGCTGCTCCCAATATTTCTGATGCATATACTATCAAT
GGTCAACCTGGTGACCTCTATAGATGCTCTAGCCAAGATACACTAAAGCTTTTAGTGAAT
CCCGGAGAAACAATACTCTTAAGGGTCATCAACGCTGCACTCAATCAACAACTCTTTTTC
TCAGTTGCCAACCACAAATTGATTGTGGTGGGAGCTGATGCTGCTTATAATAAGCCTTTT
ACGACGAATGTTATCATGGTTGGACCTGGTCAGACCACTAATGTAATACTCGCTACTGAT
CAGCCCCCTGCACGCTATTACATGGCAGCTCGTGCCTATGCCTCAGCTCAAAATGCCCCA
TTTGACAACACTACTACCACTGCTATTCTTGAGTACACGAATCTTAGGTCGGGAGCTAAT
TCAAGGCCTTTGTTGCCTCAGCTTCCAGCCTTTAATGACACAAATATTGTCACTTCTTTC
ACAAGTCAAATGAGGAGCATTCCTAAAAATAATATTAGAGTACCTAATCAGATTGATGAG
AATTTGTTCTTCACTGTTGGATTAGGCATGGTGAGTTGCACTCCTGGTCCTAGATGTCAA
GGCCCTAATAACACACGCTTTGCTGCTAGTATGAACAATGTCTCCTTTGTTTTTCCAAGA
AGAACCTCATTGCTGCAGGCTTATTACCAAAACATTCCTGGGATTTATACATTGGATTTC
CCTCCTGTTCCACCTGTAAAATTTGATTATACGGGAAATGTTTCGAGAGGACTCAGGCAG
CCAGGATTTGGGACTAAGTTGTATAAGATCAAATTTGGTTCTAATGTACAAATTGTGTTA
CAAGATACTGCTATCTTCTCAGTGGAGGACCACCCAATTCATCTTCATGGATACCATTTC
TGGGTTGTTGGACAAGGTTTTGGCAACTTCAATCCACAAACTGATACTTCCAAATTTAAC
TTGGATGATCCTCCAGTTAGGAACACAATTGATGTGCCCGTCGGTGGATGGGCAGTCATT
CGTTTTGTGGCTGATAATCCTGGTGTTTGGCTGTTTCATTGCCATATTGATTCACATTTG
GCATGGGGTCTCGGTATGTCTTTCATCGTTGAAAATGGGAAAGGAGAGAAACAGACTATG
GAGCCACCTCCACCAGATCTACCACAATGCTAG

Peptide Sequence

PEP ID

XP_016492686.1
PEP Infomation

PREDICTED: laccase-3-like [Nicotiana tabacum]
Sequence

METSKKALFKVLFATIVVILSLLPPTANADIHQHEFAVQETRITRLCKTKNIITVNGQFP
GPTLTVRNGDKLVVRVANRARYNVTIHWHGIRQMRTPWADGPEYVTQCPIKPGGVYTYRF
TIEDQEGTLWWHAHSRWLRATVYGALVILPKQGSHFPFSQPKKDIPIILGEWWNKDIIAL
QRQTQFTGAAPNISDAYTINGQPGDLYRCSSQDTLKLLVNPGETILLRVINAALNQQLFF
SVANHKLIVVGADAAYNKPFTTNVIMVGPGQTTNVILATDQPPARYYMAARAYASAQNAP
FDNTTTTAILEYTNLRSGANSRPLLPQLPAFNDTNIVTSFTSQMRSIPKNNIRVPNQIDE
NLFFTVGLGMVSCTPGPRCQGPNNTRFAASMNNVSFVFPRRTSLLQAYYQNIPGIYTLDF
PPVPPVKFDYTGNVSRGLRQPGFGTKLYKIKFGSNVQIVLQDTAIFSVEDHPIHLHGYHF
WVVGQGFGNFNPQTDTSKFNLDDPPVRNTIDVPVGGWAVIRFVADNPGVWLFHCHIDSHL
AWGLGMSFIVENGKGEKQTMEPPPPDLPQC

Transcript Sequence

Gene sequence data has not been registered.